Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKU13750.1 | AKU13752.1 | AzCIB_3857 | AzCIB_3859 | Pyruvate dehydrogenase E2 component. | Pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein. | 0.972 |
AKU13750.1 | AKU13753.1 | AzCIB_3857 | AzCIB_3860 | Pyruvate dehydrogenase E2 component. | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | 0.551 |
AKU13752.1 | AKU13750.1 | AzCIB_3859 | AzCIB_3857 | Pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein. | Pyruvate dehydrogenase E2 component. | 0.972 |
AKU13752.1 | AKU13753.1 | AzCIB_3859 | AzCIB_3860 | Pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein. | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | 0.456 |
AKU13753.1 | AKU13750.1 | AzCIB_3860 | AzCIB_3857 | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | Pyruvate dehydrogenase E2 component. | 0.551 |
AKU13753.1 | AKU13752.1 | AzCIB_3860 | AzCIB_3859 | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | Pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein. | 0.456 |
AKU13753.1 | AKU13754.1 | AzCIB_3860 | AzCIB_3861 | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | Arsenate reductase. | 0.603 |
AKU13753.1 | AKU14154.1 | AzCIB_3860 | AzCIB_4261 | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.800 |
AKU13754.1 | AKU13753.1 | AzCIB_3861 | AzCIB_3860 | Arsenate reductase. | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | 0.603 |
AKU14154.1 | AKU13753.1 | AzCIB_4261 | AzCIB_3860 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | GAF modulated sigma-54 specific transcriptional regulator, Fis family. | 0.800 |