Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13762.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
AKU13763.1
Hypothetical protein.
       0.784
AKU11688.1
Hypothetical protein.
 
     0.551
uppP
Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.543
AKU12084.1
Putative transcription regulator.
  
    0.508
AKU10714.1
Hypothetical protein.
  
     0.436
AKU13766.1
Methyltransferase.
       0.416
AKU13767.1
DMT superfamily transporter.
       0.411
AKU13765.1
Esterase.
       0.402
AKU12083.1
Nitrous-oxide reductase.
 
     0.401
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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