Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU13769.1Putative TonB family protein. (318 aa)    
Predicted Functional Partners:
AKU13032.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.899
AKU14205.1
Putative TonB-dependent receptor.
 
 
 0.836
AKU10932.1
Putative TonB-dependent receptor.
  
 
 0.822
AKU11561.1
TonB-dependent receptor.
  
 
 0.822
AKU13031.1
Biopolymer transport protein.
 
 
 0.812
AKU13768.1
Exoribonuclease II.
  
    0.803
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.780
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
  
 0.770
AKU10424.1
TonB-dependent receptor.
 
 
 
 0.753
AKU13831.1
Biopolymer transport protein.
  
 
 0.748
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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