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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13778.1Twitching motility protein. (171 aa)    
Predicted Functional Partners:
AKU13780.1
Pili chemotaxis protein similar.
 
 0.996
AKU13776.1
Type IV pilus response regulator.
 
 
 0.992
AKU13779.1
Twitching motility transmembrane protein.
 
 0.991
AKU13777.1
Type IV pilus response regulator.
 
 
 0.989
AKU12236.1
CheA signal transduction histidine kinase.
  
 0.967
AKU11977.1
Two-component system, chemotaxis family, sensor kinase.
  
 0.946
AKU13049.1
Two-component system, chemotaxis family, sensor kinase.
  
 0.946
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
  
 
 0.935
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 
 0.935
AKU13050.1
Chemotaxis regulator.
 
 
 0.895
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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