Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13778.1Twitching motility protein. (171 aa)    
Predicted Functional Partners:
AKU13780.1
Pili chemotaxis protein similar.
 
 0.996
AKU13776.1
Type IV pilus response regulator.
 
 
 0.992
AKU13779.1
Twitching motility transmembrane protein.
 
 0.992
AKU13777.1
Type IV pilus response regulator.
 
 
 0.989
AKU12236.1
CheA signal transduction histidine kinase.
  
 0.972
AKU11977.1
Two-component system, chemotaxis family, sensor kinase.
  
 0.966
AKU13049.1
Two-component system, chemotaxis family, sensor kinase.
  
 0.966
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
  
 
 0.941
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 
 0.941
AKU13050.1
Chemotaxis regulator.
 
 
 0.941
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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