Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13780.1Pili chemotaxis protein similar. (1975 aa)    
Predicted Functional Partners:
AKU13778.1
Twitching motility protein.
 
 0.996
AKU13779.1
Twitching motility transmembrane protein.
 
 0.994
AKU13052.1
Chemotaxis protein CheV-like.
 
0.984
AKU13053.1
Chemotaxis protein CheV-like.
 
0.984
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
 
 0.972
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
 
 0.972
AKU13777.1
Type IV pilus response regulator.
 
0.972
AKU13776.1
Type IV pilus response regulator.
 
0.971
AKU13050.1
Chemotaxis regulator.
  
 0.964
AKU10518.1
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.957
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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