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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13792.1Twitching mobility protein. (377 aa)    
Predicted Functional Partners:
AKU14061.1
Type IV fimbrial biogenesis protein.
  
  
 0.805
AKU13532.1
Type IV fimbrial biogenesis protein.
 
   
 0.792
AKU13533.1
Type IV fimbrial biogenesis protein, pilC.
 
   
 0.789
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.786
AKU13245.1
Type II secretion system protein.
 
   
 0.760
AKU10069.1
Type II secretion system protein F.
 
   
 0.743
AKU14057.1
Type IV fimbrial biogenesis protein.
  
   
 0.708
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
  
 0.669
AKU13791.1
Twitching mobility protein.
 
  
0.644
AKU14060.1
Type IV fimbrial biogenesis protein.
  
  
 0.629
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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