Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13798.1Cytochrome c-552 precursor protein. (102 aa)    
Predicted Functional Partners:
AKU13097.1
Cytochrome c, class I.
  
  
 
0.919
AKU13967.1
Cytochrome c, class I.
  
  
 
0.914
AKU11011.1
Cytochrome c class I.
  
  
 
0.913
AKU10955.1
Cache sensor protein.
  
 
 0.906
AKU12299.1
Putative cytochrome c.
    
 0.906
AKU10753.1
Hypothetical protein.
   
 
  0.900
AKU11182.1
Hypothetical protein.
   
 
  0.900
AKU12344.1
Hypothetical protein.
     
  0.900
AKU13355.1
Hypothetical protein.
   
 
  0.900
AKU13499.1
Hypothetical protein.
  
  
 0.683
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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