Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13807.1ABC transporter ATP-binding/permease. (727 aa)    
Predicted Functional Partners:
AKU13806.1
HlyD family secretion protein.
 
 0.983
AKU10056.1
Type I secretion membrane fusion protein, HlyD family.
 
 
 0.888
AKU13804.1
Hypothetical protein.
 
     0.873
AKU12610.1
Type I secretion protein.
 
 
 0.861
AKU13801.1
Hypothetical protein.
 
  
 0.853
AKU13802.1
Hypothetical protein.
 
  
 0.813
AKU13803.1
Hypothetical protein.
 
  
 0.773
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.765
AKU10324.1
Outer membrane adhesin like protein.
 
  
 0.757
AKU13805.1
LuxR family transcriptional regulator.
 
  
 0.741
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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