Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13811.1ABC transporter, permease protein. (289 aa)    
Predicted Functional Partners:
AKU13810.1
ABC transporter related protein.
 
 0.999
AKU13812.1
ABC transporter, periplasmic binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
AKU14153.1
ATP-binding ABC transporter protein.
     
 0.807
AKU11022.1
Lipopolysaccharide export system, permease YjgP/YjgQ family protein.
    
 0.804
AKU10551.1
Putative ABC transport system permease protein, organic solvent resistance ABC transporter permease.
    
 0.785
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.784
AKU10557.1
ABC-2 type transporter permase, antibiotic transport system permease protein.
    
  0.774
AKU11776.1
Transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.767
AKU10959.1
Polar amino acid ABC transporter; HisQ; inner membrane subunit, histidine transport system permease protein.
  
  
 0.765
AKU10426.1
Iron complex transport system ATP-binding protein.
    
 0.763
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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