Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13834.1Hypothetical protein. (466 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.973
AKU14325.1
Outer membrane efflux protein.
  
  
 0.962
AKU13739.1
Type I secretion outer membrane protein, TolC family.
     
 0.950
AKU13832.1
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.943
AKU12742.1
Outer membrane multidrug resistance lipoprotein.
  
  
 
0.926
AKU12612.1
RND efflux system, outer membrane lipoprotein, NodT family.
  
  
 
0.922
AKU12774.1
RND efflux system, outer membrane lipoprotein, NodT family.
  
  
 
0.920
AKU12775.1
Multidrug efflux system protein.
 0.890
AKU12776.1
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.877
AKU12743.1
Multidrug resistance transmembrane protein.
 
 0.875
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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