Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13836.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
AKU13839.1
High-affinity iron permease.
 
  
 0.961
AKU13840.1
Putative nitrogen fixation protein.
 
  
 0.942
AKU13838.1
Hypothetical protein.
 
   
 0.915
AKU13837.1
Hypothetical protein.
 
     0.850
AKU11772.1
Putative iron binding protein component of ABC iron transporter.
   
  
 0.829
AKU11996.1
Polyferredoxin.
 
  
 0.813
AKU13831.1
Biopolymer transport protein.
 
  
 0.482
AKU13835.1
Long-chain N-acyl amino acid synthase.
       0.464
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
       0.429
AKU14604.1
Extracellular solute-binding protein family 1.
   
  
 0.421
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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