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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13862.1Addiction module antitoxin. (87 aa)    
Predicted Functional Partners:
AKU13863.1
Hypothetical protein.
 
     0.946
AKU11184.1
Damage inducible-like protein, anti-RelE antitoxin.
 
 0.879
AKU10034.1
Helix-turn-helix motif.
 
 
 0.808
AKU11401.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.737
AKU11185.1
RelE/StbE family addiction module toxin.
 
  
 0.485
vapC-2
PilT protein domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.462
AKU10095.1
Hypothetical protein.
  
  
 0.433
AKU11298.1
Transcriptional regulator, XRE family.
 
  
 0.433
AKU14337.1
AbrB family transcriptional regulator.
    
 0.405
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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