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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13868.1Two-component response regulator. (463 aa)    
Predicted Functional Partners:
AKU13869.1
Two-component sensor kinase.
 
 0.992
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.953
AKU13870.1
Hypothetical protein.
       0.812
AKU13871.1
Putative aminotransferase.
       0.672
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
  
 
 0.615
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 
 0.615
AKU13780.1
Pili chemotaxis protein similar.
 
 
 0.568
AKU12236.1
CheA signal transduction histidine kinase.
  
 
 0.538
AKU13866.1
Hypothetical protein.
       0.536
AKU13867.1
Hypothetical protein.
       0.536
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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