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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13871.1Putative aminotransferase. (396 aa)    
Predicted Functional Partners:
AKU13870.1
Hypothetical protein.
 
     0.738
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
 
  
 0.695
AKU13868.1
Two-component response regulator.
       0.672
AKU13869.1
Two-component sensor kinase.
  
   0.672
AKU13873.1
L-fuculose phosphate aldolase protein.
  
  
 0.663
AKU14053.1
Glutamate synthase.
  
  
 0.585
AKU13512.1
Chorismate mutase/prephenate dehydratase.
 
  
 0.561
AKU11760.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.502
AKU12780.1
Pyruvate oxidoreductase.
  
  
 0.495
AKU13866.1
Hypothetical protein.
       0.472
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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