STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13895.1RND superfamily exporter. (791 aa)    
Predicted Functional Partners:
AKU13896.1
Hypothetical protein.
 
  
 0.957
AKU13894.1
Transcriptional regulator, LysR family.
 
     0.894
AKU13893.1
Hypothetical protein.
 
  
 0.890
AKU12416.1
Hypothetical protein.
 
  
 0.813
AKU12324.1
Glycosyl hydrolase.
 
  
 0.812
AKU12856.1
BNR/Asp-box repeat-containing protein.
 
  
 0.812
AKU11710.1
Hypothetical protein.
 
  
 0.809
AKU11360.1
Glycosyl hydrolase.
 
  
 0.804
AKU12262.1
Hypothetical protein.
 
  
 0.804
AKU14417.1
Hypothetical protein.
 
  
 0.792
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.