Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13953.1Two-component hybrid sensor protein. (641 aa)    
Predicted Functional Partners:
AKU11477.1
Sensory transduction histidine kinase.
 
 
0.934
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
 
 
0.932
AKU11211.1
Hypothetical protein.
 
 
0.929
AKU12838.1
Two-component hybrid histidine kinase.
  
 0.927
AKU10597.1
Putative hybrid sensor and regulator.
 
 
0.925
AKU10031.1
PAS domain S-box.
 
 
0.922
AKU13667.1
Hypothetical protein.
  
 
 0.892
AKU10518.1
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.888
tol
Tol.
 
 
0.876
AKU12151.1
Putative sensory box histidine kinase.
 
 
 0.849
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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