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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13962.1Branched-chain amino acid ABC transporter, ATP-binding protein. (280 aa)    
Predicted Functional Partners:
AKU13961.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.971
AKU13960.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.963
AKU13963.1
Long-chain acyl-CoA synthetase.
 
  
 0.962
AKU13959.1
Hypothetical protein.
 
 
 0.920
AKU14467.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.854
AKU13957.1
phenylacetate-CoA ligase.
 
    0.813
AKU13627.1
Branched-chain amino acid ABC transporter system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.812
AKU14227.1
Branched-chain amino acid ABC transporter system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.796
AKU14468.1
Branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.777
AKU13958.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 
0.720
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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