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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13970.1DedA protein. (213 aa)    
Predicted Functional Partners:
AKU11948.1
Hypothetical protein; Belongs to the MtfA family.
  
  
 0.544
AKU10353.1
Fumarate reductase, subunit C.
      
 0.530
AKU10354.1
Fumarate reductase subunit D.
      
 0.530
AKU13971.1
Phospholipase A2 family protein.
       0.491
AKU12227.1
Hypothetical protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
  
 0.465
fliW
Flagellar assembly protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
   
    0.453
AKU13969.1
Putative PAS/PAC sensor histidine kinase.
       0.449
AKU13968.1
Transcriptional regulator, LuxR family.
       0.435
AKU10452.1
Putative ABC transporter protein.
  
    0.424
AKU10451.1
Putative ABC transporter protein.
  
    0.419
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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