Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU13970.1DedA protein. (213 aa)    
Predicted Functional Partners:
AKU11948.1
Hypothetical protein; Belongs to the MtfA family.
  
  
 0.517
AKU13971.1
Phospholipase A2 family protein.
     
 0.493
AKU12227.1
Hypothetical protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
  
 0.459
AKU13969.1
Putative PAS/PAC sensor histidine kinase.
       0.448
AKU13968.1
Transcriptional regulator, LuxR family.
  
  
 0.446
AKU10452.1
Putative ABC transporter protein.
  
    0.431
AKU10451.1
Putative ABC transporter protein.
  
    0.426
fliW
Flagellar assembly protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
   
    0.424
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.413
AKU12780.1
Pyruvate oxidoreductase.
     
 0.402
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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