Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU13986.1GntR family transcriptional regulator. (223 aa)    
Predicted Functional Partners:
AKU13231.1
Transcriptional regulator, GntR family.
 
  
 0.785
AKU10449.1
IclR family transcriptional regulator.
  
  
 0.556
AKU12941.1
Acetolactate synthase 1 regulatory subunit.
  
    0.502
AKU13376.1
Transciptional regulator, IclR family.
  
  
 0.440
AKU13985.1
methylmalonyl-CoA mutase.
       0.435
AKU13419.1
Acetolactate synthase 3 regulatory subunit.
   
    0.428
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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