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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13986.1GntR family transcriptional regulator. (223 aa)    
Predicted Functional Partners:
AKU13231.1
Transcriptional regulator, GntR family.
 
  
 0.786
AKU10449.1
IclR family transcriptional regulator.
  
  
 0.543
AKU12941.1
Acetolactate synthase 1 regulatory subunit.
  
    0.480
AKU13985.1
methylmalonyl-CoA mutase.
       0.465
AKU13419.1
Acetolactate synthase 3 regulatory subunit.
   
    0.454
AKU13376.1
Transciptional regulator, IclR family.
  
  
 0.423
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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