Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU13988.1Putative two-component system sensor protein. (567 aa)    
Predicted Functional Partners:
AKU13989.1
Putative response regulator.
 
 
 0.938
AKU12770.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.771
AKU11477.1
Sensory transduction histidine kinase.
 
 
 0.770
AKU13990.1
Putative serine protease; Belongs to the peptidase S8 family.
 
   
 0.721
AKU14399.1
BssI.
  
     0.713
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
  
 
 0.684
AKU10135.1
Transcriptional regulator.
 
 
 0.683
AKU13183.1
Hypothetical protein.
 
 
   0.673
AKU13951.1
Putative two-component response regulator.
 
 
 0.666
AKU12081.1
Nitrate/nitrite response regulator.
 
 
 0.665
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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