STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13993.1Hypothetical protein. (338 aa)    
Predicted Functional Partners:
AKU13994.1
Hypothetical protein.
 
  
 0.956
AKU13011.1
Putative type 4 pilus biogenesis protein.
  
     0.557
AKU10075.1
Putative lipoprotein.
  
     0.517
AKU10215.1
Hypothetical protein.
  
     0.508
AKU10118.1
Hypothetical protein.
  
     0.502
AKU11013.1
Hypothetical protein.
  
     0.489
AKU12600.1
Hypothetical protein.
  
     0.488
AKU10123.1
Protein of unknown function (DUF4401) protein.
  
     0.484
AKU13965.1
Hypothetical protein.
  
     0.484
AKU13095.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.