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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13995.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
AKU12151.1
Putative sensory box histidine kinase.
 
 
 0.886
AKU11562.1
Signal transduction histidine kinase, glucose-6-phosphate specific.
 
 
 0.840
AKU13322.1
Sensor histidine kinase.
 
 
 0.839
AKU10951.1
Two-component system, NarL family, sensor histidine kinase.
 
 
 0.835
AKU12570.1
Sensor histidine kinase.
 
 
 0.835
AKU13969.1
Putative PAS/PAC sensor histidine kinase.
 
 
 0.830
AKU11483.1
Transcriptional regulator, LuxR family.
  
     0.767
AKU12081.1
Nitrate/nitrite response regulator.
  
     0.766
AKU11563.1
Two component LuxR family transcriptional regulator.
  
     0.765
AKU12152.1
LuxR family transcriptional regulator.
  
     0.765
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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