Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU13998.1Flp pilus assembly protein, protease CpaA. (176 aa)    
Predicted Functional Partners:
AKU13999.1
ATPase.
 
   
 0.930
AKU14000.1
Pilus assembly transmembrane protein.
 
   
 0.888
AKU14001.1
Outer membrane channel protein; Belongs to the bacterial secretin family.
 
   
 0.872
AKU14008.1
Putative Flp pilus assembly protein, tight adherence protein B.
 
   
 0.862
AKU14006.1
Flp pilus assembly protein, ATPase.
 
   
 0.852
AKU14007.1
Secretion ATPase protein, type II secretion system protein E.
 
   
 0.851
AKU14009.1
Type II secretion system protein, tight adherence protein C.
 
   
 0.849
AKU14005.1
Flp pilus assembly protein TadG.
 
     0.841
AKU14003.1
Hypothetical protein.
 
     0.835
AKU14004.1
TadE-like protein.
 
     0.828
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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