Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU14001.1Outer membrane channel protein; Belongs to the bacterial secretin family. (567 aa)    
Predicted Functional Partners:
AKU14000.1
Pilus assembly transmembrane protein.
 
 
 0.998
AKU14006.1
Flp pilus assembly protein, ATPase.
 
 
 0.998
AKU14007.1
Secretion ATPase protein, type II secretion system protein E.
 
 
 0.995
AKU14008.1
Putative Flp pilus assembly protein, tight adherence protein B.
 
 
 0.995
AKU14009.1
Type II secretion system protein, tight adherence protein C.
 
 
 0.993
AKU14005.1
Flp pilus assembly protein TadG.
 
  
 0.951
AKU14003.1
Hypothetical protein.
 
  
 0.950
AKU14004.1
TadE-like protein.
 
  
 0.949
AKU13997.1
Pilus assembly protein, pilin component.
 
  
 0.906
AKU13998.1
Flp pilus assembly protein, protease CpaA.
 
   
 0.872
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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