STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14020.1Substrate-binding periplasmic (PBP) ABC transporter protein. (307 aa)    
Predicted Functional Partners:
AKU10425.1
Transmembrane ABC transporter protein,permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.983
AKU10426.1
Iron complex transport system ATP-binding protein.
 
 0.981
AKU14018.1
L-threonine-O-3-phosphate decarboxylase.
  
  
 0.846
AKU14019.1
Putative Fe-S oxidoreductase.
  
    0.779
cobD-2
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.715
AKU11775.1
Iron (III) transport system permease.
   
 
 0.637
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.629
AKU13839.1
High-affinity iron permease.
   
  
 0.588
AKU14043.1
Pyridoxamine 5-phosphate oxidase family protein.
  
    0.585
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.574
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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