Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14021.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
AKU10046.1
ATPase, AAA family protein.
 
 0.716
AKU13893.1
Hypothetical protein.
 
  
 0.712
AKU14170.1
Hypothetical protein.
 
 
 0.706
AKU12848.1
Hypothetical protein.
 
  
 0.672
ftsH
Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.664
AKU13894.1
Transcriptional regulator, LysR family.
  
     0.650
AKU13988.1
Putative two-component system sensor protein.
 
     0.645
AKU10054.1
ABC transporter related protein.
 
 
 
 0.639
AKU12847.1
Hypothetical protein.
 
     0.626
rlpA
Lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
 0.618
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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