Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU14023.1Methyltransferase. (243 aa)    
Predicted Functional Partners:
AKU10916.1
AMP-dependent synthetase and ligase.
  
 
 0.714
AKU12034.1
Hypothetical protein.
  
     0.527
AKU09995.1
Hypothetical protein.
  
 
 0.500
AKU14081.1
Peptidoglycan-binding protein.
 
     0.466
AKU10169.1
Hypothetical protein.
  
   
 0.455
AKU10353.1
Fumarate reductase, subunit C.
 
     0.446
AKU10189.1
Type 12 methyltransferase.
   
 0.433
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
 0.433
AKU13556.1
Hypothetical protein.
   
 0.433
AKU13949.1
Putative methyltransferase.
 
  
 0.433
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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