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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14047.1Bilirubin oxidase. (652 aa)    
Predicted Functional Partners:
AKU11624.1
Multicopper oxidase.
  
  
 0.664
AKU10161.1
Putative multicupper oxidase.
  
     0.592
AKU11059.1
Silver exporting P-type ATPase.
  
  
 0.574
AKU11608.1
Silver exporting P-type ATPase.
  
  
 0.574
AKU12559.1
Transcription accessory protein.
  
  
  0.541
tatC
Sec-independent protein translocase subunit C; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.538
tatB
Sec-independent protein translocase subunit B; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
   
 
 0.533
AKU11057.1
Permease.
  
  
 0.533
AKU10028.1
Cytochrome c, class I.
    
 
 0.531
AKU10181.1
Cytochrome c, class I.
    
 
 0.531
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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