Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU14057.1Type IV fimbrial biogenesis protein. (724 aa)    
Predicted Functional Partners:
AKU14058.1
Type IV fimbrial biogenesis protein.
 
 
 0.994
AKU14060.1
Type IV fimbrial biogenesis protein.
 
 
 0.990
AKU14061.1
Type IV fimbrial biogenesis protein.
 
 
 0.984
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
 
 0.980
AKU09947.1
Hypothetical protein.
 
 
 
 0.942
AKU10623.1
Type IV fimbrial biogenesis protein.
  
   
 0.775
AKU12718.1
Type IV pilus biogenesis protein.
  
   
 0.771
AKU13006.1
Type IV pilus assembly protein PilE.
 
   
 0.752
AKU12933.1
Hypothetical protein.
  
  
 0.719
AKU13792.1
Twitching mobility protein.
  
  
 0.718
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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