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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14058.1Type IV fimbrial biogenesis protein. (171 aa)    
Predicted Functional Partners:
AKU14060.1
Type IV fimbrial biogenesis protein.
 
 
 0.997
AKU14057.1
Type IV fimbrial biogenesis protein.
 
 
 0.995
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
 
 0.995
AKU14061.1
Type IV fimbrial biogenesis protein.
 
 
 0.988
AKU09947.1
Hypothetical protein.
 
 
   0.857
AKU10088.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
  
 
 0.841
AKU13239.1
General secretion pathway protein D.
  
 
 0.841
AKU12718.1
Type IV pilus biogenesis protein.
  
   
 0.809
AKU10623.1
Type IV fimbrial biogenesis protein.
 
   
 0.800
AKU10086.1
General secretion pathway protein M.
  
 
 0.796
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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