Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14084.1Hypothetical protein. (817 aa)    
Predicted Functional Partners:
AKU14087.1
Hypothetical protein.
 
     0.890
AKU14088.1
Hypothetical protein.
 
     0.882
AKU14089.1
Putative transmembrane sensor protein.
 
     0.851
AKU12601.1
Hypothetical protein.
  
     0.769
AKU09933.1
Hypothetical protein.
  
    0.768
AKU12600.1
Hypothetical protein.
  
     0.768
AKU13298.1
Hypothetical protein.
  
     0.766
AKU13965.1
Hypothetical protein.
  
     0.766
AKU11013.1
Hypothetical protein.
  
     0.764
AKU11803.1
Hypothetical protein.
  
     0.761
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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