STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14091.1Nitroreductase. (211 aa)    
Predicted Functional Partners:
AKU14090.1
Putative pirin-like protein; Belongs to the pirin family.
       0.683
AKU10479.1
biotin--acetyl-CoA-carboxylase ligase.
  
    0.580
AKU14089.1
Putative transmembrane sensor protein.
       0.569
AKU14088.1
Hypothetical protein.
       0.492
AKU10934.1
Hypothetical protein.
  
  
 0.487
AKU11206.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.482
AKU14087.1
Hypothetical protein.
       0.467
AKU14233.1
Hypothetical protein.
  
  
 0.464
AKU14086.1
Hypothetical protein.
       0.455
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.443
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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