Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AKU14100.1Transcriptional regulator, TetR family. (233 aa)    
Predicted Functional Partners:
AKU14099.1
acyl-CoA dehydrogenase.
 
   
 0.681
AKU14097.1
Alpha-subunit of fatty acid oxidation complex.
 
  
 0.663
AKU14098.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.560
AKU14101.1
Fibronectin type III repeat, DUF2341 repeat and LamG-like domain-containing protein.
 
     0.560
AKU14096.1
acyl-CoA thioesterase.
  
    0.554
AKU14095.1
Long-chain-fatty acid transport protein.
 
     0.536
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.410
AKU14094.1
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
 
  
 0.406
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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