Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14128.1Hypothetical protein. (407 aa)    
Predicted Functional Partners:
AKU10853.1
Flagellar basal body protein.
   
    0.895
AKU10858.1
Peptidoglycan hydrolase.
   
    0.895
AKU10551.1
Putative ABC transport system permease protein, organic solvent resistance ABC transporter permease.
  
 0.894
AKU11909.1
Putative ABC transporter permease.
  
 0.894
AKU11942.1
ABC transporter, permease protein.
  
 0.894
AKU12146.1
Hypothetical protein.
  
 0.894
AKU11477.1
Sensory transduction histidine kinase.
  
  
 0.887
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
  
  
 0.887
AKU10031.1
PAS domain S-box.
 
  
 0.884
AKU12240.1
Complex sensory protein.
  
  
 0.881
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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