STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14153.1ATP-binding ABC transporter protein. (240 aa)    
Predicted Functional Partners:
AKU11022.1
Lipopolysaccharide export system, permease YjgP/YjgQ family protein.
 
 
 0.996
AKU11021.1
Hypothetical protein.
   
 0.992
AKU14322.1
ABC-2 type transporter.
   
 0.964
AKU10547.1
Hypothetical protein.
  
 
 0.948
lptA
OstA-like family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.
  
  
 0.894
recX
Regulatory protein, RexX; Modulates RecA activity; Belongs to the RecX family.
       0.822
lpxA
UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.810
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.806
AKU10551.1
Putative ABC transport system permease protein, organic solvent resistance ABC transporter permease.
 
  
  0.795
AKU12146.1
Hypothetical protein.
 
  
  0.788
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.