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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14160.1Putative transglycosylase. (643 aa)    
Predicted Functional Partners:
AKU14161.1
NAD-dependent epimerase/dehydratase.
       0.705
cca
Multifunctional tRNA nucleotidyl transferase/23-cyclic phosphodiesterase/2nucleotidase/phosphatase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.
 
    0.651
AKU13263.1
Lytic transglycosylase.
 
  
 0.615
AKU14159.1
Hypothetical protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.614
AKU14162.1
Glutathione S-transferase.
       0.610
AKU12053.1
Membrane-bound lytic murein transglycosylase D.
 
  
 0.545
AKU10443.1
Transglycosylase.
 
   
 0.529
mrdA
Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
 
  
 0.506
AKU10871.1
Flagellar-specific ATP synthase.
  
  
 0.490
fliE
Flagellar hook-basal body complex protein.
  
  
 0.490
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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