Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14182.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
AKU14183.1
Hypothetical protein.
 
  
 0.982
AKU12786.1
Hypothetical protein.
   
    0.782
AKU14184.1
Hypothetical protein.
       0.773
AKU12788.1
Hypothetical protein.
   
    0.555
AKU12142.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.476
AKU11892.1
Hypothetical protein.
  
     0.473
AKU10034.1
Helix-turn-helix motif.
   
  
 0.462
AKU13502.1
Hypothetical protein.
  
  
 0.455
AKU14181.1
Hypothetical protein.
       0.449
AKU11472.1
Hypothetical protein.
  
    0.437
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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