Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14189.1Hypothetical protein. (468 aa)    
Predicted Functional Partners:
AKU14187.1
Hypoxanthine phosphoribosyltransferase.
  
    0.804
AKU14188.1
Hypothetical protein.
       0.778
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
  
 0.738
AKU10867.1
Flagellar motor switch protein.
   
   0.712
AKU11660.1
Phosphoesterase, PA-phosphatase related protein.
  
     0.697
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
    0.629
AKU11657.1
Hypothetical protein.
  
     0.620
AKU10052.1
Hypothetical protein.
  
     0.594
AKU10196.1
Hypothetical protein.
  
     0.594
AKU11498.1
Hypothetical protein.
  
     0.575
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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