Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14213.1Hypothetical protein. (1078 aa)    
Predicted Functional Partners:
AKU14215.1
Hypothetical protein.
 
  
 0.974
AKU14216.1
Hypothetical protein.
 
  
 0.970
AKU14217.1
Hypothetical protein.
 
  
 0.953
AKU13009.1
Putative type 4 pilus biogenesis protein.
 
  
 0.917
AKU14218.1
Hypothetical protein.
 
  
 0.916
AKU14214.1
Hypothetical protein.
  
  
 0.912
AKU13008.1
Type 4 fimbrial biogenesis relatedtransmembrane protein.
 
  
 0.905
AKU13007.1
Type IV pilus transmembrane protein FimT.
 
  
 0.876
AKU13012.1
Fimbrial pilin related protein.
 
  
 0.870
AKU13006.1
Type IV pilus assembly protein PilE.
 
  
 0.848
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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