Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14219.1Cytochrome c class I. (361 aa)    
Predicted Functional Partners:
AKU10980.1
Cytochrome c family protein.
  
  
 
0.921
AKU13761.1
Cytochrome c family protein.
  
  
 
0.921
AKU13168.1
Phosphodiesterase I.
    
 0.917
AKU10953.1
Hypothetical protein.
    
 0.911
AKU13169.1
Sulfur covalently-binding protein.
    
 0.911
AKU11052.1
Anaerobic arsenite oxidase ArxA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.905
AKU13193.1
Thiosulfate sulfurtransferase.
  
 
 0.905
AKU10182.1
Cytochrome c, class I.
 
 0.717
AKU10662.1
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.684
AKU13839.1
High-affinity iron permease.
    
 0.663
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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