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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14233.1Hypothetical protein. (424 aa)    
Predicted Functional Partners:
AKU14234.1
Nitroreductase.
 
  
 0.966
AKU12600.1
Hypothetical protein.
  
     0.766
AKU12601.1
Hypothetical protein.
 
     0.764
AKU14215.1
Hypothetical protein.
  
     0.764
AKU09933.1
Hypothetical protein.
  
     0.763
AKU14147.1
Hypothetical protein.
  
     0.758
AKU10215.1
Hypothetical protein.
  
     0.757
AKU11013.1
Hypothetical protein.
  
     0.749
AKU11104.1
BNR/Asp-box repeat-containing protein.
  
     0.748
AKU10123.1
Protein of unknown function (DUF4401) protein.
  
     0.747
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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