Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14240.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
AKU10988.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.906
AKU10993.1
ABC-2 type transporter permase, antibiotic transport system permease protein.
  
  
  0.835
AKU10992.1
Hypothetical protein.
  
  
 0.788
AKU14239.1
Hypothetical protein.
       0.779
AKU10991.1
40-residue YVTN family beta-propeller repeat protein.
  
    0.772
AKU10990.1
ABC transporter related protein.
 
  
 0.770
AKU10954.1
Quinoprotein ethanol dehydrogenase.
  
   
 0.759
AKU14238.1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein.
 
     0.718
AKU10994.1
Extracellular solute-binding protein family 3.
 
 
 0.708
AKU10989.1
ABC transporter, sulfonate transport system ATP-binding protein.
 
 0.686
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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