Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14243.1Hypothetical protein. (330 aa)    
Predicted Functional Partners:
AKU14242.1
Hypothetical protein.
 
     0.940
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
       0.758
AKU14241.1
Hypothetical protein.
 
    
0.756
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
   
   0.744
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
   0.744
AKU10299.1
Hypothetical protein.
 
  
 0.517
AKU14239.1
Hypothetical protein.
 
    
0.490
AKU10300.1
Peptidase U32 falily.
  
     0.467
AKU14240.1
Hypothetical protein.
       0.456
AKU14245.1
Putative MFS transporter.
       0.445
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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