Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14247.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
AKU09995.1
Hypothetical protein.
  
  
 0.859
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.614
AKU14246.1
Mg(2+) chelatase family protein.
       0.606
AKU10706.1
2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase.
 
  
 0.581
AKU10773.1
Biotin synthesis protein.
  
  
 0.564
AKU10189.1
Type 12 methyltransferase.
     
 0.556
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
     
 0.556
AKU13556.1
Hypothetical protein.
     
 0.556
AKU10467.1
Ubiquinone biosynthesis hydroxylase family protein.
 
  
 0.544
bioC
Biotin synthesis protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
  
 0.532
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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