Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14273.1Transposase. (115 aa)    
Predicted Functional Partners:
AKU14274.1
Transposase IS66.
 
     0.903
AKU14272.1
Transposase IS3/IS911 family protein.
  
  
 0.781
AKU11350.1
Transposase IS66.
 
     0.778
AKU12379.1
Transposase IS66.
 
     0.778
AKU13082.1
Transposase IS66.
 
     0.778
AKU13139.1
Transposase IS66.
 
     0.778
AKU14297.1
Transposase IS66.
 
     0.778
AKU14270.1
N-6 DNA methylase.
       0.773
AKU14271.1
Restriction modification system DNA specificity domain-containing protein.
       0.773
AKU14269.1
Hypothetical protein.
       0.471
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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