Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14290.1LysR family transcriptional regulator. (213 aa)    
Predicted Functional Partners:
AKU14453.1
Hypothetical protein.
  
     0.732
AKU14431.1
Hypothetical protein.
  
     0.720
AKU14353.1
Hypothetical protein.
  
     0.714
AKU14429.1
Hypothetical protein.
  
     0.713
AKU14340.1
Hypothetical protein.
  
     0.710
AKU14342.1
Hypothetical protein.
  
     0.706
AKU14455.1
Hypothetical protein.
  
     0.705
AKU14336.1
Hypothetical protein.
  
  
 0.702
AKU14454.1
Hypothetical protein.
  
     0.699
AKU14349.1
Hypothetical protein.
  
     0.695
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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