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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU14306.1TodD; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (288 aa)    
Predicted Functional Partners:
AKU14307.1
TodA.
 
 
 0.887
AKU14311.1
Biphenyl dioxygenase subunit alpha.
 
 
 0.836
AKU14305.1
3-isopropylcatechol-2,3-dioxygenase.
 
 
 0.817
bbsC
BbsC.
  
 
   0.806
AKU14310.1
TodC2.
  
 
 0.801
AKU11367.1
Short-chain dehydrogenase of unknown substrate specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.794
AKU12347.1
DitB.
  
     0.769
AKU12205.1
3-ketoacyl-(acyl-carrier-protein) reductase.
  
     0.762
AKU14308.1
TodB.
 
  
 0.760
AKU12338.1
Dioxygenase DitA oxygenase component small subunit.
 
  
 0.693
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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