Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14317.1Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B. (270 aa)    
Predicted Functional Partners:
AKU14316.1
Hypothetical protein.
 
     0.650
AKU13877.1
Pirin-like protein; Belongs to the pirin family.
 
  
 0.580
AKU14090.1
Putative pirin-like protein; Belongs to the pirin family.
 
  
 0.572
AKU14315.1
Hypothetical protein.
  
  
 0.479
AKU11408.1
2-hydroxyhexa-2,4-dienoate hydratase.
  
  
 0.465
AKU14304.1
2-hydroxypenta-2,4-dienoate hydratase.
  
  
 0.465
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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