Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU14320.1NADH:flavin oxidoreductase/NADH oxidase. (363 aa)    
Predicted Functional Partners:
AKU11375.1
NADH:flavin oxidoreductase/NADH oxidase.
  
  
 
0.907
AKU11200.1
NADH-flavin oxidoreductase/NADH oxidase.
  
  
 
0.906
AKU14319.1
Hypothetical protein.
  
    0.758
AKU14318.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase superfamily.
       0.608
AKU13509.1
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
  
 0.403
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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