Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU14321.1ABC-2 type transporter. (368 aa)    
Predicted Functional Partners:
AKU14323.1
Monosaccharide-transporting ATPase.
 
 0.969
AKU14324.1
Secretion protein HlyD family protein.
 
  
 0.950
AKU14325.1
Outer membrane efflux protein.
 
   
 0.759
AKU14322.1
ABC-2 type transporter.
 
    
0.750
AKU14327.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.724
AKU14326.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.686
AKU12054.1
ATPase component dipeptide/oligopeptide/nickel ABC transporter; Belongs to the ABC transporter superfamily.
  
 
 0.654
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.648
AKU14566.1
Hypothetical protein.
  
 
  0.634
AKU10294.1
Lipooligosaccharide transport system ATP-binding protein.
  
 
 0.613
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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